SOCS1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SOCS1 mutation is significantly associated with the total protein of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SOCS1-associated genes across cancer lineages are p62 Lck ligand, PKC-a_pS657, and VEGFR2. Each is linked with SOCS1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SOCS1-to-partner and partner-to-SOCS1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SOCS1→partner) and Y-score (partner→SOCS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp62 Lck ligand →+0.694+2.817<.001.03621
UCECPKC-a_pS657 →+0.599+2.820.010.03621
UCECVEGFR2 →+0.602+2.820<.001.03611
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Exploration