SNX5

Across TCGA patient cohorts, SNX5 protein abundance is significantly associated with the RNA expression of many other genes, with 16,151 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNX5-associated genes across cancer lineages are IL16, SNX2, and TRAV25. Each is linked with SNX5 in more than 6 cancer types. Because this analysis shows association rather than direction, both SNX5-to-partner and partner-to-SNX5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX5 versus IL16 in PDAC, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX5→partner) and Y-score (partner→SNX5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PDAC	IL16 →	+0.651	+0.227	<.001	<.001	3	7
OV	SNX2 →	+0.532	+0.312	.001	.001	2	7
UCEC	TRAV25 →	+0.634	+0.166	<.001	.002	3	6
BRCA	CBX7 →	+0.663	+0.264	<.001	.001	3	6
HNSC	IFFO1 →	+0.479	+0.276	<.001	<.001	3	6
UCEC	LY86 →	+0.736	+0.202	<.001	.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,151 associations by consensus.

SNX5 vs IL16 — PDAC

Explore this scatter interactively →