SNX30

Across TCGA patient cohorts, SNX30 protein abundance is significantly associated with the RNA expression of many other genes, with 15,041 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNX30-associated genes across cancer lineages are SLC46A2, MGP, and PTPRB. Each is linked with SNX30 in more than 5 cancer types. Because this analysis shows association rather than direction, both SNX30-to-partner and partner-to-SNX30 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX30 versus SLC46A2 in LUAD, with a Pearson correlation of 0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX30→partner) and Y-score (partner→SNX30) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	SLC46A2 →	+1.099	+0.349	<.001	<.001	3	6
OV	MGP →	+1.255	+0.349	<.001	.003	3	5
LSCC	PTPRB →	+0.579	+0.244	<.001	<.001	3	5
OV	ZCCHC24 →	+1.206	+0.345	<.001	.001	3	5
LUAD	CDCA3 →	-0.717	-0.345	<.001	<.001	3	5
LUAD	SKA1 →	-0.875	-0.426	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,041 associations by consensus.

SNX30 vs SLC46A2 — LUAD

Explore this scatter interactively →