SNX30

Across TCGA cell cohorts, SNX30 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,978 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SNX30-associated GO terms across cancer lineages are Piecemeal microautophagy of the nucleus, Regulation of vacuole organization, and Microautophagy. Each is linked with SNX30 in more than 16 cancer types. Because this analysis shows association rather than direction, both SNX30-to-partner and partner-to-SNX30 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Piecemeal microautophagy of the nucleus grouped by SNX30-low versus SNX30-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX30→partner) and Y-score (partner→SNX30) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_SCLC	Piecemeal microautophagy of the nucleus →	+0.091	+0.959	<.001	<.001	3	17
BLOOD_Myeloma	Regulation of vacuole organization →	+0.109	+1.332	<.001	<.001	3	15
LUNG_NSCLC_LUSC	Microautophagy →	+0.087	+0.798	.007	.008	2	16
STOMACH	Process utilizing autophagic mechanism →	+0.065	+0.911	<.001	<.001	3	14
STOMACH	Autophagy →	+0.065	+0.911	<.001	<.001	3	14
STOMACH	Macroautophagy →	+0.064	+0.834	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,978 associations by consensus.

Piecemeal microautophagy of the nucleus by SNX30 expression — LUNG_SCLC

Explore this box plot interactively →