SNX3

Across TCGA patient cohorts, SNX3 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,454 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SNX3-associated proteins across cancer lineages are VTA1, HBS1L, and MAP3K4. Each is linked with SNX3 in more than 5 cancer types. Because this analysis shows association rather than direction, both SNX3-to-partner and partner-to-SNX3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX3 versus VTA1 in OV, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX3→partner) and Y-score (partner→SNX3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	VTA1 →	+0.391	+0.497	.001	.002	3	6
OV	HBS1L →	+0.604	+0.555	.003	.004	3	5
OV	MAP3K4 →	+0.341	+0.523	<.001	<.001	3	5
LSCC	SDF2L1 →	-0.325	-0.302	<.001	.002	3	4
BRCA	NTHL1 →	-0.327	-0.423	<.001	<.001	3	4
BRCA	ATP5F1C →	-0.241	-0.405	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,454 associations by consensus.

SNX3 vs VTA1 — OV

Explore this scatter interactively →