SNX25

Across TCGA patient cohorts, SNX25 protein abundance is significantly associated with the RNA expression of many other genes, with 6,139 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SNX25-associated genes across cancer lineages are LRRN4, CX3CR1, and ITGA9-AS1. Each is linked with SNX25 in more than 3 cancer types. Because this analysis shows association rather than direction, both SNX25-to-partner and partner-to-SNX25 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX25 versus LRRN4 in LUAD, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX25→partner) and Y-score (partner→SNX25) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	LRRN4 →	+1.484	+0.383	<.001	<.001	3	3
BRCA	CX3CR1 →	+1.585	+0.627	.008	.003	2	4
LUAD	ITGA9-AS1 →	+0.710	+0.414	<.001	<.001	3	3
LUAD	F11 →	+0.545	+0.203	.003	.002	3	3
LUAD	RAPGEF2 →	+0.354	+0.302	.001	.001	3	3
LUAD	NT5C1A →	+0.981	+0.284	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,139 associations by consensus.

SNX25 vs LRRN4 — LUAD

Explore this scatter interactively →