SNX20

Across TCGA patient cohorts, SNX20 protein abundance is significantly associated with the RNA expression of many other genes, with 8,664 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNX20-associated genes across cancer lineages are TCL1A, FCER2, and TMEM176B. Each is linked with SNX20 in more than 3 cancer types. Because this analysis shows association rather than direction, both SNX20-to-partner and partner-to-SNX20 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX20 versus TCL1A in BRCA, with a Pearson correlation of 0.56.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX20→partner) and Y-score (partner→SNX20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	TCL1A →	+1.064	+0.528	<.001	<.001	3	3
BRCA	FCER2 →	+0.801	+0.585	<.001	<.001	3	3
BRCA	TMEM176B →	+0.950	+0.499	.002	.001	3	3
HNSC	TNFSF8 →	+1.588	+0.798	.007	.009	2	4
BRCA	LY9 →	+0.765	+0.681	<.001	<.001	3	3
BRCA	CCR7 →	+1.551	+0.581	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,664 associations by consensus.

SNX20 vs TCL1A — BRCA

Explore this scatter interactively →