SNX19P4

Across TCGA patient cohorts, SNX19P4 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,986 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SNX19P4-associated GO terms across cancer lineages are Negative regulation of mRNA processing, Golgi to endosome transport, and Fatty acid catabolic process. Each is linked with SNX19P4 in more than 14 cancer types. Because this analysis shows association rather than direction, both SNX19P4-to-partner and partner-to-SNX19P4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of mRNA processing grouped by SNX19P4-low versus SNX19P4-high in KIRP.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX19P4→partner) and Y-score (partner→SNX19P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIRP	Negative regulation of mRNA processing →	+0.062	+0.066	<.001	<.001	3	15
ESCA	Golgi to endosome transport →	+0.059	+0.237	<.001	<.001	3	15
ESCA	Fatty acid catabolic process →	+0.041	+0.260	<.001	<.001	3	14
ESCA	miRNA metabolic process →	+0.049	+0.217	<.001	<.001	3	14
ESCA	Regulation of RNA splicing →	+0.059	+0.271	<.001	<.001	3	14
STAD	Monocarboxylic acid catabolic process →	+0.038	+0.287	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,986 associations by consensus.

Negative regulation of mRNA processing by SNX19P4 expression — KIRP

Explore this box plot interactively →