SNX19

Across TCGA cell cohorts, SNX19 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,555 significant associations in total. CNS shows the largest number of these associations.

The most reproducible SNX19-associated GO terms across cancer lineages are Dense core granule maturation, Secretory granule maturation, and Protein polyubiquitination. Each is linked with SNX19 in more than 18 cancer types. Because this analysis shows association rather than direction, both SNX19-to-partner and partner-to-SNX19 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Dense core granule maturation grouped by SNX19-low versus SNX19-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX19→partner) and Y-score (partner→SNX19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIVER	Dense core granule maturation →	+0.933	+1.379	<.001	.002	3	19
LIVER	Secretory granule maturation →	+0.933	+1.379	<.001	.002	3	19
STOMACH	Protein polyubiquitination →	+0.058	+0.791	<.001	.003	1	16
UPPER_AERODIGESTIVE_TRACT	Golgi vesicle transport →	+0.079	+1.519	<.001	<.001	3	14
STOMACH	Vesicle-mediated transport to the plasma membrane →	+0.086	+0.639	.001	.002	1	15
UPPER_AERODIGESTIVE_TRACT	Macroautophagy →	+0.085	+1.727	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,555 associations by consensus.

Dense core granule maturation by SNX19 expression — LIVER

Explore this box plot interactively →