SNX18

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNX18 protein abundance is significantly associated with the RNA expression of many other genes, with 11,536 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible SNX18-associated genes across cancer lineages are IL16, PODN, and IFFO1. Each is linked with SNX18 in more than 9 cancer types. Because this analysis shows association rather than direction, both SNX18-to-partner and partner-to-SNX18 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX18 versus IL16 in OV, with a Pearson correlation of 0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX18→partner) and Y-score (partner→SNX18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVIL16 →+1.098+0.736<.001<.001310
OVPODN →+1.220+0.486<.001<.001310
OVIFFO1 →+0.840+0.617<.001<.00139
CCRCCC7 →+2.072+0.232<.001<.00139
BRCAFLI1 →+0.718+0.322<.001<.00139
OVABCA6 →+0.796+0.566<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,536 associations by consensus.

SNX18 vs IL16 — OV

Per-sample scatter of SNX18 vs IL16 in OV (Pearson r = 0.46).

Explore this scatter interactively →

Exploration