SNX17

Across TCGA patient cohorts, SNX17 protein abundance is significantly associated with the RNA expression of many other genes, with 16,884 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNX17-associated genes across cancer lineages are IFFO1, CNRIP1, and MEOX2. Each is linked with SNX17 in more than 7 cancer types. Because this analysis shows association rather than direction, both SNX17-to-partner and partner-to-SNX17 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX17 versus IFFO1 in OV, with a Pearson correlation of 0.36.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX17→partner) and Y-score (partner→SNX17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	IFFO1 →	+0.708	+0.185	.001	.005	3	8
UCEC	CNRIP1 →	+1.046	+0.266	<.001	<.001	3	8
BRCA	MEOX2 →	+0.996	+0.199	<.001	<.001	3	7
BRCA	DCN →	+1.553	+0.235	<.001	<.001	3	7
HNSC	NCKAP1L →	+0.787	+0.155	<.001	<.001	3	7
BRCA	PDE1B →	+0.532	+0.200	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,884 associations by consensus.

SNX17 vs IFFO1 — OV

Explore this scatter interactively →