SNX16

Across TCGA patient cohorts, SNX16 RNA expression is significantly associated with the RNA expression of many other genes, with 20,302 significant associations in total. UVM shows the largest number of these associations.

The most reproducible SNX16-associated genes across cancer lineages are TTC33, ZNF654, and CCDC121. Each is linked with SNX16 in more than 33 cancer types. Because this analysis shows association rather than direction, both SNX16-to-partner and partner-to-SNX16 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX16 versus TTC33 in UVM, with a Pearson correlation of 0.89.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX16→partner) and Y-score (partner→SNX16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UVM	TTC33 →	+1.578	+1.368	<.001	<.001	3	34
TGCT	ZNF654 →	+1.382	+0.923	<.001	<.001	3	33
UVM	CCDC121 →	+1.045	+1.217	<.001	<.001	3	33
UVM	UBR5 →	+1.828	+1.224	<.001	<.001	3	33
DLBC	MED23 →	+1.250	+0.956	<.001	<.001	3	33
UVM	STAM2 →	+1.565	+1.425	<.001	<.001	3	33

Each partner links to its Q-omics profile. Showing the 6 strongest of 20,302 associations by consensus.

SNX16 vs TTC33 — UVM

Explore this scatter interactively →