SNX16

Across TCGA cell cohorts, SNX16 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,642 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SNX16-associated GO terms across cancer lineages are Golgi organization, Early endosome to late endosome transport, and Vesicle-mediated transport between endosomal compartments. Each is linked with SNX16 in more than 12 cancer types. Because this analysis shows association rather than direction, both SNX16-to-partner and partner-to-SNX16 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi organization grouped by SNX16-low versus SNX16-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX16→partner) and Y-score (partner→SNX16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Golgi organization →	+0.064	+0.738	.001	.007	2	13
STOMACH	Early endosome to late endosome transport →	+0.080	+1.214	.002	<.001	3	12
STOMACH	Vesicle-mediated transport between endosomal compartments →	+0.080	+1.214	.002	<.001	3	12
LUNG_NSCLC_LUSC	Protein K48-linked deubiquitination →	+0.095	+1.107	<.001	.001	3	11
BLOOD_Lymphoma	Nuclear membrane organization →	+0.058	+0.679	<.001	<.001	3	11
STOMACH	Protein targeting to lysosome →	+0.105	+1.056	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,642 associations by consensus.

Golgi organization by SNX16 expression — STOMACH

Explore this box plot interactively →