SNX13

Across TCGA patient cohorts, SNX13 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,812 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible SNX13-associated proteins across cancer lineages are NUDCD3, POLR1F, and PURB. Each is linked with SNX13 in more than 6 cancer types. Because this analysis shows association rather than direction, both SNX13-to-partner and partner-to-SNX13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX13 versus NUDCD3 in LSCC, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX13→partner) and Y-score (partner→SNX13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	NUDCD3 →	+0.305	+0.398	<.001	<.001	3	7
HNSC	POLR1F →	+0.384	+0.637	<.001	<.001	3	6
GBM	PURB →	+0.272	+0.301	<.001	.001	3	6
PDAC	FOXK1 →	+0.308	+0.340	.003	<.001	3	5
LUAD	FOXK1_S213 →	+0.403	+0.317	<.001	.001	3	5
LUAD	SPCS3 →	-0.583	-0.466	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,812 associations by consensus.

SNX13 vs NUDCD3 — LSCC

Explore this scatter interactively →