SNX13

Across TCGA patient cohorts, SNX13 protein abundance is significantly associated with the RNA expression of many other genes, with 14,059 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SNX13-associated genes across cancer lineages are RAC1, SHLD2, and TAF1D. Each is linked with SNX13 in more than 3 cancer types. Because this analysis shows association rather than direction, both SNX13-to-partner and partner-to-SNX13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX13 versus RAC1 in LUAD, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX13→partner) and Y-score (partner→SNX13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	RAC1 →	+0.563	+0.388	<.001	<.001	3	4
OV	SHLD2 →	-0.503	-0.346	.002	.002	3	3
UCEC	TAF1D →	-0.535	-0.344	<.001	<.001	3	3
UCEC	IGHV1-18 →	-1.743	-0.262	.004	<.001	3	3
UCEC	LSM3P4 →	+1.132	+0.407	.006	.001	3	3
LSCC	TESK2 →	-0.595	-0.228	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,059 associations by consensus.

SNX13 vs RAC1 — LUAD

Explore this scatter interactively →