SNX13

Across TCGA cell cohorts, SNX13 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,419 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SNX13-associated GO terms across cancer lineages are Golgi vesicle transport, Positive regulation of isotype switching to IgG isotypes, and Endoplasmic reticulum to Golgi vesicle-mediated transport. Each is linked with SNX13 in more than 13 cancer types. Because this analysis shows association rather than direction, both SNX13-to-partner and partner-to-SNX13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi vesicle transport grouped by SNX13-low versus SNX13-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX13→partner) and Y-score (partner→SNX13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	Golgi vesicle transport →	+0.044	+0.588	<.001	<.001	3	14
BLOOD_Lymphoma	Positive regulation of isotype switching to IgG isotypes →	+0.157	+0.923	<.001	.003	2	14
CNS	Endoplasmic reticulum to Golgi vesicle-mediated transport →	+0.088	+1.090	<.001	<.001	3	12
UPPER_AERODIGESTIVE_TRACT	Protein autoubiquitination →	+0.058	+0.845	<.001	<.001	3	11
UPPER_AERODIGESTIVE_TRACT	Establishment of protein localization to vacuole →	+0.064	+0.533	.003	.007	2	12
BLOOD_Lymphoma	Viral translational termination-reinitiation →	+0.091	+0.990	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,419 associations by consensus.

Golgi vesicle transport by SNX13 expression — SKIN

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