SNX12

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SNX12 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,425 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SNX12-associated GO terms across cancer lineages are Mitotic spindle elongation, Mitotic spindle midzone assembly, and Response to oscillatory fluid shear stress. Each is linked with SNX12 in more than 10 cancer types. Because this analysis shows association rather than direction, both SNX12-to-partner and partner-to-SNX12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mitotic spindle elongation grouped by SNX12-low versus SNX12-high in BLOOD_Lymphoma.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX12→partner) and Y-score (partner→SNX12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaMitotic spindle elongation →+0.227+1.100<.001<.001311
BLOOD_LymphomaMitotic spindle midzone assembly →+0.227+1.100<.001<.001311
STOMACHResponse to oscillatory fluid shear stress →+0.180+0.683.001<.001311
STOMACHCellular response to oscillatory fluid shear stress →+0.180+0.683.001<.001311
STOMACHVascular endothelial cell response to oscillatory fluid shear stress →+0.180+0.683.001<.001311
BLOOD_LymphomaSpindle elongation →+0.213+1.121<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,425 associations by consensus.

Mitotic spindle elongation by SNX12 expression — BLOOD_Lymphoma

Box plot of Mitotic spindle elongation in SNX12-low vs SNX12-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration