SNUPN

Across TCGA patient cohorts, SNUPN protein abundance is significantly associated with the RNA expression of many other genes, with 7,114 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNUPN-associated genes across cancer lineages are WDR61, RAB11A, and RPLP1. Each is linked with SNUPN in more than 5 cancer types. Because this analysis shows association rather than direction, both SNUPN-to-partner and partner-to-SNUPN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNUPN versus WDR61 in COAD, with a Pearson correlation of 0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNUPN→partner) and Y-score (partner→SNUPN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	WDR61 →	+0.442	+0.239	.005	.006	2	6
OV	RAB11A →	+0.547	+0.501	<.001	<.001	3	4
OV	RPLP1 →	+0.679	+0.289	<.001	<.001	3	4
LSCC	UBL7 →	+0.508	+0.367	<.001	<.001	3	4
LSCC	MFAP1 →	+0.606	+0.343	<.001	<.001	3	4
LSCC	CLPX →	+0.472	+0.332	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,114 associations by consensus.

SNUPN vs WDR61 — COAD

Explore this scatter interactively →