SNTB2

Across TCGA cell cohorts, SNTB2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,161 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SNTB2-associated GO terms across cancer lineages are Nuclear transport, Establishment of RNA localization, and Nucleocytoplasmic transport. Each is linked with SNTB2 in more than 13 cancer types. Because this analysis shows association rather than direction, both SNTB2-to-partner and partner-to-SNTB2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nuclear transport grouped by SNTB2-low versus SNTB2-high in BREAST.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNTB2→partner) and Y-score (partner→SNTB2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	Nuclear transport →	+0.073	+0.849	<.001	<.001	3	14
UPPER_AERODIGESTIVE_TRACT	Establishment of RNA localization →	+0.112	+1.287	.001	<.001	3	14
PANCREAS	Nucleocytoplasmic transport →	+0.070	+0.638	.001	.001	3	14
BREAST	Regulation of chromosome organization →	+0.082	+0.817	<.001	<.001	3	13
UPPER_AERODIGESTIVE_TRACT	Protein localization to chromosome →	+0.105	+0.949	.004	.006	2	14
UPPER_AERODIGESTIVE_TRACT	RNA localization →	+0.105	+1.407	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,161 associations by consensus.

Nuclear transport by SNTB2 expression — BREAST

Explore this box plot interactively →