SNRPGP18

Across TCGA patient cohorts, SNRPGP18 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,822 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SNRPGP18-associated proteins across cancer lineages are SMC1A, SMC3, and TAF5. Each is linked with SNRPGP18 in more than 3 cancer types. Because this analysis shows association rather than direction, both SNRPGP18-to-partner and partner-to-SNRPGP18 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNRPGP18 versus SMC1A in LSCC, with a Pearson correlation of 0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPGP18→partner) and Y-score (partner→SNRPGP18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SMC1A →	+0.306	+0.555	<.001	<.001	3	4
LSCC	SMC3 →	+0.319	+0.527	<.001	<.001	3	4
GBM	TAF5 →	+0.183	+0.434	<.001	<.001	3	4
GBM	CBX8 →	+0.418	+0.457	<.001	<.001	3	4
LSCC	DHX9 →	+0.167	+0.315	<.001	<.001	3	4
GBM	DIDO1 →	+0.278	+0.444	.001	.004	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,822 associations by consensus.

SNRPGP18 vs SMC1A — LSCC

Explore this scatter interactively →