SNRPGP15

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNRPGP15 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,533 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNRPGP15-associated proteins across cancer lineages are ILVBL, PRCC, and DHX9. Each is linked with SNRPGP15 in more than 3 cancer types. Because this analysis shows association rather than direction, both SNRPGP15-to-partner and partner-to-SNRPGP15 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPGP15→partner) and Y-score (partner→SNRPGP15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCILVBL →+0.318+0.629<.001<.00134
BRCAPRCC →+0.306+0.783.001.00134
LSCCDHX9 →+0.251+0.699<.001<.00134
HNSCGIMAP8 →-0.369-0.937<.001<.00134
LSCCS100A11 →+0.538+0.696<.001<.00134
LSCCGIPC1 →+0.380+0.732<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,533 associations by consensus.

Exploration