SNRPEP4

Across TCGA patient cohorts, SNRPEP4 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,864 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNRPEP4-associated proteins across cancer lineages are UTP25, DHX9, and RBM8A. Each is linked with SNRPEP4 in more than 6 cancer types. Because this analysis shows association rather than direction, both SNRPEP4-to-partner and partner-to-SNRPEP4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNRPEP4 versus UTP25 in UCEC, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPEP4→partner) and Y-score (partner→SNRPEP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	UTP25 →	+0.404	+0.971	<.001	<.001	3	7
LSCC	DHX9 →	+0.278	+0.658	<.001	<.001	3	7
BRCA	RBM8A →	+0.321	+1.395	<.001	<.001	3	5
LSCC	CMSS1 →	+0.414	+0.607	.002	<.001	3	5
LSCC	IPO9 →	+0.400	+0.746	<.001	<.001	3	5
LSCC	FXR1 →	+0.392	+0.571	.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,864 associations by consensus.

SNRPEP4 vs UTP25 — UCEC

Explore this scatter interactively →