SNRPD2

Across TCGA patient cohorts, SNRPD2 protein abundance is significantly associated with the RNA expression of many other genes, with 18,822 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNRPD2-associated genes across cancer lineages are TIMM8A, VRK1, and DKC1. Each is linked with SNRPD2 in more than 8 cancer types. Because this analysis shows association rather than direction, both SNRPD2-to-partner and partner-to-SNRPD2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNRPD2 versus TIMM8A in LSCC, with a Pearson correlation of 0.60.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPD2→partner) and Y-score (partner→SNRPD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	TIMM8A →	+0.752	+0.228	<.001	<.001	3	9
GBM	VRK1 →	+0.909	+0.357	<.001	<.001	3	8
LSCC	DKC1 →	+0.751	+0.241	<.001	<.001	3	8
UCEC	HDGF →	+0.567	+0.156	<.001	<.001	3	8
UCEC	C1orf131 →	+0.485	+0.192	<.001	<.001	3	8
GBM	NUP35 →	+0.696	+0.361	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 18,822 associations by consensus.

SNRPD2 vs TIMM8A — LSCC

Explore this scatter interactively →