SNRPD1

Across TCGA patient cohorts, SNRPD1 protein abundance is significantly associated with the RNA expression of many other genes, with 15,533 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNRPD1-associated genes across cancer lineages are VRK1, SUV39H1, and OIP5. Each is linked with SNRPD1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SNRPD1-to-partner and partner-to-SNRPD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNRPD1 versus VRK1 in LSCC, with a Pearson correlation of 0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPD1→partner) and Y-score (partner→SNRPD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	VRK1 →	+0.763	+0.230	<.001	<.001	3	6
LSCC	SUV39H1 →	+0.679	+0.365	<.001	<.001	3	6
LSCC	OIP5 →	+0.768	+0.287	<.001	<.001	3	6
BRCA	FOXM1 →	+1.593	+0.205	<.001	<.001	3	6
BRCA	KIF20A →	+1.234	+0.230	<.001	<.001	3	6
BRCA	CENPA →	+1.362	+0.233	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,533 associations by consensus.

SNRPD1 vs VRK1 — LSCC

Explore this scatter interactively →