SNRPCP6

Across TCGA patient cohorts, SNRPCP6 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,589 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SNRPCP6-associated GO terms across cancer lineages are Base-excision repair, Positive regulation of post-translational protein modification, and Positive regulation of DNA metabolic process. Each is linked with SNRPCP6 in more than 18 cancer types. Because this analysis shows association rather than direction, both SNRPCP6-to-partner and partner-to-SNRPCP6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Base-excision repair grouped by SNRPCP6-low versus SNRPCP6-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPCP6→partner) and Y-score (partner→SNRPCP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Base-excision repair →	+0.045	+0.207	<.001	<.001	3	19
ESCA	Positive regulation of post-translational protein modification →	+0.057	+0.295	.001	<.001	3	18
ESCA	Positive regulation of DNA metabolic process →	+0.057	+0.314	.001	<.001	3	18
ESCA	Protein acylation →	+0.055	+0.357	<.001	<.001	3	18
ESCA	DNA strand elongation →	+0.050	+0.226	.002	<.001	3	17
ESCA	Regulation of DNA biosynthetic process →	+0.060	+0.305	.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,589 associations by consensus.

Base-excision repair by SNRPCP6 expression — ESCA

Explore this box plot interactively →