SNRPBP1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNRPBP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,129 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNRPBP1-associated proteins across cancer lineages are MEPCE_S390, SH3KBP1_S587, and SHANK3_S795. Each is linked with SNRPBP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SNRPBP1-to-partner and partner-to-SNRPBP1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPBP1→partner) and Y-score (partner→SNRPBP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVMEPCE_S390 →-0.782-0.121.004.00832
OVSH3KBP1_S587 →+1.006+0.098.006.00232
OVSHANK3_S795 →+0.771+0.103<.001.00432
LSCCANK2 →+0.282+0.246.002.00132
HNSCKMT2B_T2083 →-0.295-0.349.002<.00132
PDACCHGA_S322 →+0.863+0.191<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,129 associations by consensus.

Exploration