SNRPB

Across TCGA patient cohorts, SNRPB mutation is significantly associated with the immune_cell of many other genes, with 4 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SNRPB-associated genes across cancer lineages are Melanocytes, Endothelial cells, and mv Endothelial cells. Each is linked with SNRPB in more than 1 cancer types. Because this analysis shows association rather than direction, both SNRPB-to-partner and partner-to-SNRPB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Melanocytes grouped by SNRPB-low versus SNRPB-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPB→partner) and Y-score (partner→SNRPB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	Melanocytes →	+0.069	+2.616	.013	.006	3	2
SKCM	Endothelial cells →	-0.037	-3.103	.040	.019	3	1
SKCM	mv Endothelial cells →	-0.030	-3.694	.014	.001	3	1
UCEC	Th2 cells →	+0.270	+3.169	.006	.020	1	1

Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

Melanocytes by SNRPB expression — SKCM

Explore this box plot interactively →