SNRNP200

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SNRNP200 mass-spec protein differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of SNRNP200’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where SNRNP200 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types SNRNP200 is over-expressed in tumor, although a few such as PDAC show the opposite, repressed pattern.

COAD, HNSC, and CCRCC are the cancer types where SNRNP200 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SNRNP200 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADMaleAll+0.402<.00112view →
HNSCMaleIV+0.374<.00111view →
CCRCCMaleIII,IV+0.170<.00110view →
LSCCMaleII,III,IV+0.459<.0019view →
LUADMaleAll+0.348<.0019view →
OVAllAll+0.394.0022view →
PDACFemaleAll−0.073.0451view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

SNRNP200–COAD

Tumor-vs-normal mass-spec protein box plot for SNRNP200 in COAD.

Open the COAD breakdown →

Exploration