SNORD3A

Across TCGA patient cohorts, SNORD3A RNA expression is significantly associated with the go_rna of many other GO terms, with 6,410 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible SNORD3A-associated GO terms across cancer lineages are Metaphase chromosome alignment, Kinetochore organization, and DNA-templated DNA replication. Each is linked with SNORD3A in more than 14 cancer types. Because this analysis shows association rather than direction, both SNORD3A-to-partner and partner-to-SNORD3A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Metaphase chromosome alignment grouped by SNORD3A-low versus SNORD3A-high in GBM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD3A→partner) and Y-score (partner→SNORD3A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	Metaphase chromosome alignment →	+0.030	+0.165	.002	<.001	3	13
COAD	Kinetochore organization →	+0.039	+0.115	<.001	<.001	3	13
LUSC	DNA-templated DNA replication →	+0.025	+0.087	<.001	<.001	3	13
UCEC	Mitotic metaphase chromosome alignment →	+0.024	+0.107	<.001	<.001	3	13
COAD	Centromere complex assembly →	+0.034	+0.110	<.001	<.001	3	13
GBM	Regulation of ubiquitin protein ligase activity →	+0.039	+0.232	.001	<.001	1	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,410 associations by consensus.

Metaphase chromosome alignment by SNORD3A expression — GBM

Explore this box plot interactively →