SNORD30

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNORD30 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,893 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SNORD30-associated GO terms across cancer lineages are Regulation of DNA replication, Protein localization to mitochondrion, and Protein-DNA complex assembly. Each is linked with SNORD30 in more than 15 cancer types. Because this analysis shows association rather than direction, both SNORD30-to-partner and partner-to-SNORD30 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA replication grouped by SNORD30-low versus SNORD30-high in THYM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD30→partner) and Y-score (partner→SNORD30) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
THYMRegulation of DNA replication →+0.049+0.431<.001<.001316
KIRCProtein localization to mitochondrion →+0.027+0.074<.001<.001315
LAMLProtein-DNA complex assembly →+0.029+0.716<.001<.001314
DLBCTranscription initiation at RNA polymerase II promoter →+0.050+0.437.005.005215
DLBCRNA localization →+0.049+0.490.006.001215
DLBCTranscription preinitiation complex assembly →+0.056+0.467.003.003215
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,893 associations by consensus.

Regulation of DNA replication by SNORD30 expression — THYM

Box plot of Regulation of DNA replication in SNORD30-low vs SNORD30-high samples in THYM.

Explore this box plot interactively →

Exploration