Across TCGA patient cohorts, SNORD116-29 mutation is significantly associated with the RNA expression of many other genes, with 38 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SNORD116-29-associated genes across cancer lineages are RNU4-64P, CAMTA1-AS2, and RNU7-54P. Each is linked with SNORD116-29 in more than 1 cancer types. Because this analysis shows association rather than direction, both SNORD116-29-to-partner and partner-to-SNORD116-29 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD116-29→partner) and Y-score (partner→SNORD116-29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	RNU4-64P →	+0.198	+4.884	<.001	.004	3	2
SKCM	CAMTA1-AS2 →	+0.071	+4.402	<.001	.002	3	1
SKCM	RNU7-54P →	+0.534	+5.356	<.001	<.001	3	1
SKCM	RN7SL554P →	+0.088	+4.614	<.001	.006	3	1
SKCM	RN7SL813P →	+0.101	+4.385	<.001	.008	3	1
SKCM	MIR6839 →	+0.205	+5.408	<.001	.002	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 38 associations by consensus.

Exploration

SNORD116-29 survival (RNA) · tumor vs normal (RNA) · all SNORD116-29 data types