SNORD116-24

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SNORD116-24 RNA differs between tumor and matched normal tissue in 14 of 18 cancer types tested, making tumor–normal expression one of SNORD116-24’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where SNORD116-24 RNA is repressed in tumor relative to normal tissue. In most cancer types SNORD116-24 is over-expressed in tumor, although a few such as COAD and KIRC show the opposite, repressed pattern.

COAD, KIRC, and THCA are the cancer types where SNORD116-24 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SNORD116-24 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADMaleII,III,IV−0.926<.00110view →
KIRCAllAll−0.625<.0019view →
THCAAllII,III,IV−1.433<.0018view →
HNSCFemaleIV−1.091.0017view →
BRCAFemaleAll−0.577<.0016view →
LUSCAllAll−0.567<.0016view →
BLCAMaleIII,IV−1.434.0093view →
STADAllAll−0.836.0073view →
KIRPAllAll−0.753.0012view →
UCECAllAll−0.694.0172view →
READFemaleAll−1.384.0161view →
CHOLAllAll+1.005.0241view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 14 lineages.

Exploration