SNORD115-39

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNORD115-39 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,745 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SNORD115-39-associated proteins across cancer lineages are SNX9, EIF3A, and EIF3L. Each is linked with SNORD115-39 in more than 1 cancer types. Because this analysis shows association rather than direction, both SNORD115-39-to-partner and partner-to-SNORD115-39 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD115-39→partner) and Y-score (partner→SNORD115-39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSNX9 →-0.299-0.765.002.00332
GBMEIF3A →-0.165-1.042<.001<.00132
GBMEIF3L →-0.183-1.316<.001<.00132
GBMIKBKG →-0.179-0.973.003.00132
GBMLMBRD2 →+0.374+0.941.002.00432
GBMLRMDA →-0.461-0.758.002.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,745 associations by consensus.

Exploration