SNORD109A

Across TCGA patient cohorts, SNORD109A mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SNORD109A-associated genes across cancer lineages are RNA5SP332, OR10G9, and RN7SKP157. Each is linked with SNORD109A in more than 1 cancer types. Because this analysis shows association rather than direction, both SNORD109A-to-partner and partner-to-SNORD109A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP332 grouped by SNORD109A-low versus SNORD109A-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD109A→partner) and Y-score (partner→SNORD109A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	RNA5SP332 →	+0.268	+7.816	<.001	.008	3	1
SKCM	OR10G9 →	+0.039	+7.816	<.001	.008	3	1
SKCM	RN7SKP157 →	+0.124	+7.816	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

RNA5SP332 by SNORD109A expression — SKCM

Explore this box plot interactively →