SNORD108

Across TCGA patient cohorts, SNORD108 mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SNORD108-associated genes across cancer lineages are LINC02479, RNU6-947P, and PRR23D2. Each is linked with SNORD108 in more than 1 cancer types. Because this analysis shows association rather than direction, both SNORD108-to-partner and partner-to-SNORD108 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC02479 grouped by SNORD108-low versus SNORD108-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD108→partner) and Y-score (partner→SNORD108) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	LINC02479 →	+0.049	+7.816	<.001	.008	3	1
SKCM	RNU6-947P →	+0.258	+7.816	<.001	.008	3	1
SKCM	PRR23D2 →	+0.019	+7.816	<.001	.008	3	1
SKCM	MIR3152 →	+0.478	+7.816	<.001	.008	3	1
SKCM	FAM32DP →	+0.094	+7.816	<.001	.008	3	1
SKCM	MRPS5P4 →	+0.139	+7.816	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

LINC02479 by SNORD108 expression — SKCM

Explore this box plot interactively →