Across TCGA cell cohorts, SNN RNA expression is significantly associated with the go_rna of many other GO terms, with 5,098 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SNN-associated GO terms across cancer lineages are Positive regulation of transcription initiation by RNA polymerase II, Negative regulation of myoblast fusion, and Regulation of protein localization to nucleus. Each is linked with SNN in more than 14 cancer types. Because this analysis shows association rather than direction, both SNN-to-partner and partner-to-SNN results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNN→partner) and Y-score (partner→SNN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Positive regulation of transcription initiation by RNA polymerase II →	+0.061	+1.479	.003	.006	3	15
LARGE_INTESTINE	Negative regulation of myoblast fusion →	+0.089	+0.980	<.001	.005	3	13
STOMACH	Regulation of protein localization to nucleus →	+0.098	+1.581	<.001	.001	3	12
STOMACH	Regulation of stem cell population maintenance →	+0.096	+1.425	.003	.006	3	12
URINARY_TRACT	Negative regulation of syncytium formation by plasma membrane fusion →	+0.088	+1.313	<.001	.003	2	13
BREAST	Regulation of nucleotide-excision repair →	+0.141	+1.391	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,098 associations by consensus.

Exploration

SNN survival (RNA) · tumor vs normal (RNA) · all SNN data types