SNHG11

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNHG11 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,644 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNHG11-associated proteins across cancer lineages are RPRD1B, ADNP, and CSE1L. Each is linked with SNHG11 in more than 5 cancer types. Because this analysis shows association rather than direction, both SNHG11-to-partner and partner-to-SNHG11 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNHG11 versus RPRD1B in OV, with a Pearson correlation of 0.59.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNHG11→partner) and Y-score (partner→SNHG11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVRPRD1B →+0.417+0.557<.001<.00136
LSCCADNP →+0.390+0.516<.001<.00136
LSCCCSE1L →+0.406+0.572<.001<.00135
CCRCCEIF6 →+0.334+0.367<.001<.00135
LSCCRBM12 →+0.208+0.485<.001<.00135
COADMOCS3 →+0.441+0.744<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,644 associations by consensus.

SNHG11 vs RPRD1B — OV

Per-sample scatter of SNHG11 vs RPRD1B in OV (Pearson r = 0.59).

Explore this scatter interactively →

Exploration