SNED1

Across TCGA patient cohorts, SNED1 protein abundance is significantly associated with the RNA expression of many other genes, with 12,281 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SNED1-associated genes across cancer lineages are MAGI2-AS3, LTBP2, and RECK. Each is linked with SNED1 in more than 7 cancer types. Because this analysis shows association rather than direction, both SNED1-to-partner and partner-to-SNED1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNED1 versus MAGI2-AS3 in BRCA, with a Pearson correlation of 0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNED1→partner) and Y-score (partner→SNED1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	MAGI2-AS3 →	+0.957	+0.902	<.001	<.001	3	8
BRCA	LTBP2 →	+1.217	+1.020	<.001	<.001	3	7
BRCA	RECK →	+0.949	+0.624	<.001	<.001	3	7
OV	ISLR →	+1.996	+1.022	<.001	<.001	3	7
BRCA	FBN1 →	+1.549	+0.904	<.001	<.001	3	7
UCEC	GAS6 →	+1.340	+0.630	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,281 associations by consensus.

SNED1 vs MAGI2-AS3 — BRCA

Explore this scatter interactively →