SNED1

Across TCGA cell cohorts, SNED1 RNA expression is significantly associated with the RNA expression of many other genes, with 10,611 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible SNED1-associated genes across cancer lineages are CARF, SPPL2B, and SBNO2. Each is linked with SNED1 in more than 8 cancer types. Because this analysis shows association rather than direction, both SNED1-to-partner and partner-to-SNED1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNED1 versus CARF in KIDNEY, with a Pearson correlation of 0.50.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNED1→partner) and Y-score (partner→SNED1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIDNEY	CARF →	+1.149	+0.738	<.001	<.001	3	9
UPPER_AERODIGESTIVE_TRACT	SPPL2B →	+1.400	+0.645	<.001	<.001	3	9
UPPER_AERODIGESTIVE_TRACT	SBNO2 →	+1.231	+0.611	<.001	<.001	3	9
UPPER_AERODIGESTIVE_TRACT	SH2B1 →	+1.194	+0.609	<.001	<.001	3	8
LARGE_INTESTINE	MTA1 →	+1.096	+1.017	<.001	<.001	3	8
LARGE_INTESTINE	TBC1D9B →	+0.985	+1.245	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,611 associations by consensus.

SNED1 vs CARF — KIDNEY

Explore this scatter interactively →