SNED1

Across TCGA cell cohorts, SNED1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,092 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SNED1-associated GO terms across cancer lineages are Endosomal transport, Negative regulation of myoblast fusion, and Negative regulation of syncytium formation by plasma membrane fusion. Each is linked with SNED1 in more than 11 cancer types. Because this analysis shows association rather than direction, both SNED1-to-partner and partner-to-SNED1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endosomal transport grouped by SNED1-low versus SNED1-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNED1→partner) and Y-score (partner→SNED1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	Endosomal transport →	+0.072	+0.824	<.001	<.001	3	12
UPPER_AERODIGESTIVE_TRACT	Negative regulation of myoblast fusion →	+0.113	+0.622	<.001	<.001	3	12
UPPER_AERODIGESTIVE_TRACT	Negative regulation of syncytium formation by plasma membrane fusion →	+0.137	+0.820	<.001	<.001	3	12
UPPER_AERODIGESTIVE_TRACT	Cytosolic transport →	+0.074	+0.684	<.001	<.001	3	11
SOFT_TISSUE	Otolith mineralization →	+0.124	+1.496	<.001	<.001	3	11
UPPER_AERODIGESTIVE_TRACT	Regulation of syncytium formation by plasma membrane fusion →	+0.086	+0.584	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,092 associations by consensus.

Endosomal transport by SNED1 expression — UPPER_AERODIGESTIVE_TRACT

Explore this box plot interactively →