SNED1-AS1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNED1-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,588 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible SNED1-AS1-associated proteins across cancer lineages are PRKG1, PURA, and RACGAP1. Each is linked with SNED1-AS1 in more than 4 cancer types. Because this analysis shows association rather than direction, both SNED1-AS1-to-partner and partner-to-SNED1-AS1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNED1-AS1→partner) and Y-score (partner→SNED1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPRKG1 →+0.547+0.706<.001.00135
OVPURA →+0.363+0.597.006.00435
UCECRACGAP1 →-0.587-1.037.001<.00135
LUADZWILCH →-0.471-0.810<.001<.00135
CCRCCNCAPD2 →-0.750-0.713.001.00935
LUADNDC80 →-0.677-0.828<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,588 associations by consensus.

Exploration