SNAPC2

Across TCGA cell cohorts, SNAPC2 mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. CNS shows the largest number of these associations.

The most reproducible SNAPC2-associated genes across cancer lineages are APOC4. Each is linked with SNAPC2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SNAPC2-to-partner and partner-to-SNAPC2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, APOC4 grouped by SNAPC2-low versus SNAPC2-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNAPC2→partner) and Y-score (partner→SNAPC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CNS	APOC4 →	+0.235	+4.472	<.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

APOC4 by SNAPC2 expression — CNS

Explore this box plot interactively →