SMYD3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SMYD3 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,476 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SMYD3-associated GO terms across cancer lineages are Adaptive immune response, Heme biosynthetic process, and Heme metabolic process. Each is linked with SMYD3 in more than 7 cancer types. Because this analysis shows association rather than direction, both SMYD3-to-partner and partner-to-SMYD3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMYD3→partner) and Y-score (partner→SMYD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINAdaptive immune response →-0.063-0.679.003.00528
BLOOD_LeukemiaHeme biosynthetic process →+0.075+1.087.002<.00137
LUNG_NSCLC_LUSCHeme metabolic process →+0.113+1.506.002.00226
URINARY_TRACTTissue homeostasis →-0.067-0.977<.001<.00135
SKINPositive regulation of immune effector process →-0.056-0.610<.001.00135
SKINImmune response-regulating cell surface receptor signaling pathway →-0.039-0.642.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,476 associations by consensus.

Exploration