SMYD3-AS1

associated omics data
SMYD3 antisense RNA 1Genealiases: []

Q-omics provides the consensus-scored SMYD3-AS1 profile across patient tissues and cancer cell-line models. SMYD3-AS1 expression is associated with patient survival in 19 of 34 cancer types, with the highest sampling consensus in MESO. Among the 18 cancer types available for tumor–normal comparison, SMYD3-AS1 is differentially expressed in 6, with the highest sampling consensus in BRCA. Additionally, SMYD3-AS1 RNA expression shows 17,871 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight MESO, BRCA, and LSCC as cancer lineages where SMYD3-AS1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SMYD3-AS1 survival associations across molecular data types. SMYD3-AS1 RNA expression shows survival associations in the most cancer types (19). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SMYD3-AS1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier19MESO (148)view →
This table ranks reproducible SMYD3-AS1 RNA expression–survival associations across cancer types. High SMYD3-AS1 expression shows unfavorable associations in MESO, READ, KICH, ACC and CESC, but favorable associations in BRCA. The MESO Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify MESO as the clearest survival context for SMYD3-AS1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
MESOOSTertileIII,IV0.1200.644<.001148view →
READDFSTertileAll0.2060.599<.00193view →
KICHOSTertileII,III,IV0.5870.976<.00192view →
ACCOSTertileAll0.2310.734<.00184view →
CESCOSQuartileII,III,IV0.3120.651.00272view →
BRCADFSMedianIV0.7660.308<.00164view →
Pink = unfavorable, green = favorable. all 19 lineages →

SMYD3-AS1-MESO (OS)

Kaplan–Meier survival curve for SMYD3-AS1 RNA expression in MESO: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SMYD3-AS1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 6. The strongest signals are observed in BRCA for RNA.
SMYD3-AS1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot6BRCA (8)view →
This table ranks reproducible tumor–normal expression differences for SMYD3-AS1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SMYD3-AS1 shows lower tumor expression in THCA and higher tumor expression in BRCA, LIHC, PAAD, STAD and KIRC. The BRCA box plot shows higher SMYD3-AS1 RNA expression in tumor versus normal tissue (log2 FC = +0.681, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BRCAFemaleII,III,IV+0.681<.0018view →
LIHCAllII,III,IV+0.082.0223view →
PAADMaleAll+0.210.0192view →
STADAllAll+0.171.0122view →
THCAFemaleAll−0.056.0471view →
KIRCAllII,III,IV+0.036.0261view →
Green = repressed in tumor. all 6 lineages →

SMYD3-AS1-BRCA

Tumor-vs-normal expression box plot for SMYD3-AS1 in BRCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SMYD3-AS1 in patient tissues and cancer cell lines. In patient samples, SMYD3-AS1 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)17,871LSCC (5115)view →
RNA12,683LAML (4401)view →