SMURF1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMURF1 mutation is significantly associated with the RNA expression of many other genes, with 5,475 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SMURF1-associated genes across cancer lineages are RN7SL66P, RNA5SP436, and MIR4727. Each is linked with SMURF1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SMURF1-to-partner and partner-to-SMURF1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMURF1→partner) and Y-score (partner→SMURF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRN7SL66P →+0.086+4.332.001.00633
UCECRNA5SP436 →+0.151+2.011<.001.00733
UCECMIR4727 →+0.186+1.927.001.00532
UCECSNORD116-4 →+0.620+1.246<.001.00932
SKCMHNRNPA1P29 →+0.035+3.328.002.00332
BRCAYWHAQP1 →+0.083+3.813<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,475 associations by consensus.

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