SMTNL2

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMTNL2 mutation is significantly associated with the immune_cell of many other genes, with 2 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SMTNL2-associated genes across cancer lineages are Monocytes and Macrophages. Each is linked with SMTNL2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SMTNL2-to-partner and partner-to-SMTNL2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMTNL2→partner) and Y-score (partner→SMTNL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMonocytes →+0.012+5.225<.001.03431
UCECMacrophages →+0.018+2.902.017.00131
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

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