Across TCGA cell cohorts, SMTNL2 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,183 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible SMTNL2-associated GO terms across cancer lineages are Positive regulation of monoatomic ion transport, Positive regulation of DNA recombination, and Regulation of DNA repair. Each is linked with SMTNL2 in more than 9 cancer types. Because this analysis shows association rather than direction, both SMTNL2-to-partner and partner-to-SMTNL2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMTNL2→partner) and Y-score (partner→SMTNL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OVARY	Positive regulation of monoatomic ion transport →	-0.095	-0.802	<.001	.001	3	10
SOFT_TISSUE	Positive regulation of DNA recombination →	+0.080	+1.189	<.001	.002	3	9
SOFT_TISSUE	Regulation of DNA repair →	+0.061	+0.958	<.001	<.001	3	8
BONE	RNA catabolic process →	+0.053	+0.951	.004	.002	3	8
BONE	Nucleic acid catabolic process →	+0.040	+0.768	.002	.001	3	8
SOFT_TISSUE	Positive regulation of double-strand break repair via homologous recombination →	+0.095	+1.299	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,183 associations by consensus.

Exploration

SMTNL2 survival (RNA) · tumor vs normal (RNA) · all SMTNL2 data types