SMTN

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SMTN RNA expression is significantly associated with the go_rna of many other GO terms, with 4,519 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SMTN-associated GO terms across cancer lineages are Regulation of mitotic cytokinetic process, Positive regulation of mitotic cytokinetic process, and Regulation of cytokinetic process. Each is linked with SMTN in more than 10 cancer types. Because this analysis shows association rather than direction, both SMTN-to-partner and partner-to-SMTN results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMTN→partner) and Y-score (partner→SMTN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONERegulation of mitotic cytokinetic process →+0.087+1.166.004.009311
BONEPositive regulation of mitotic cytokinetic process →+0.087+1.166.004.009311
BONERegulation of cytokinetic process →+0.087+1.166.004.009311
BREASTCell division →+0.069+0.978<.001<.001311
BONEAssembly of actomyosin apparatus involved in cytokinesis →+0.181+1.268<.001<.001310
BONEActomyosin contractile ring assembly →+0.181+1.268<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,519 associations by consensus.

Exploration