SMPD4P2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMPD4P2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,489 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SMPD4P2-associated GO terms across cancer lineages are Methylation, Regulation of DNA repair, and Nucleotide-excision repair. Each is linked with SMPD4P2 in more than 18 cancer types. Because this analysis shows association rather than direction, both SMPD4P2-to-partner and partner-to-SMPD4P2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMPD4P2→partner) and Y-score (partner→SMPD4P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADMethylation →+0.064+0.287<.001<.001319
STADRegulation of DNA repair →+0.070+0.261<.001<.001318
STADNucleotide-excision repair →+0.057+0.247<.001<.001318
ESCAMismatch repair →+0.070+0.213<.001<.001318
STADtRNA metabolic process →+0.068+0.254<.001<.001318
STADRNA modification →+0.064+0.249<.001<.001318
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,489 associations by consensus.

Exploration