SMPD4BP

Across TCGA patient cohorts, SMPD4BP RNA expression is significantly associated with the protein abundance of many other proteins, with 11,132 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SMPD4BP-associated proteins across cancer lineages are SMC1A, SMC3, and THOC2. Each is linked with SMPD4BP in more than 6 cancer types. Because this analysis shows association rather than direction, both SMPD4BP-to-partner and partner-to-SMPD4BP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMPD4BP versus SMC1A in GBM, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SMPD4BP→partner) and Y-score (partner→SMPD4BP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	SMC1A →	+0.350	+0.656	<.001	<.001	3	7
GBM	SMC3 →	+0.320	+0.587	<.001	<.001	3	7
GBM	THOC2 →	+0.242	+0.530	.002	.001	3	6
COAD	TSN →	+0.314	+0.752	<.001	<.001	3	6
GBM	PRPF40A →	+0.195	+0.350	<.001	.001	3	6
LSCC	MFAP1 →	+0.254	+0.695	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,132 associations by consensus.

SMPD4BP vs SMC1A — GBM

Explore this scatter interactively →